MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-242-P10

Family name MIR-242 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-242-P9 
Orthologues Agr-Mir-242  Bfl-Mir-242  Bko-Mir-242  Bpl-Mir-242  Cbr-Mir-242  Cel-Mir-242  Cte-Mir-242  Eba-Mir-242  Lan-Mir-242  Lhy-Mir-242  Mgi-Mir-242  Mom-Mir-242  Npo-Mir-242  Ofu-Mir-242  Pau-Mir-242  Pca-Mir-242  Pfl-Mir-242  Pmi-Mir-242  Rph-Mir-242  Sko-Mir-242  Snu-Mir-242  Spu-Mir-242  War-Mir-242 
Node of Origin (locus) A. vaga
Node of Origin (family) Nephrozoa
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075492.1: 7934575-7934649 [+] Ensembl
Seed UGCGUAG
Precursor
(pre-Mir +30nt flank)		 
GAAUGUAAUAUCAUCCUGUUGCGUUGUAUUUUGCGUAGGCGUUUUUGCAAGGAUAGGUGCACUUUCUUGUGUAGAAAAUUUCCUUGCAUAACGUGAUAUGCAAGUACCACUGGGAUUGUUCAUCUAAUUAAAUCU
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Structure
        10          20         30         40        50        60       
GAAUGUAAUAUCAUCCU--   G -| U      U     G-     UU        UAGGUGCACUUUC 
                   GUU C GU GUAUUU GCGUA  GCGUU  UGCAAGGA             \
                   UAG G CA CAUGAA CGUAU  UGCAA  ACGUUCCU             U
UCUAAAUUAAUCUACUUGU   G U^ C      -     AG     U-        UUAAAAGAUGUGU 
   130       120       110        100        90         80        70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
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Mature sequence

Ava-Mir-242-P10_5p
mirBase accessionNone
Sequence 
0- UUGCGUAGGCGUUUUUGCAAGGA -23
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Star sequence

Ava-Mir-242-P10_3p* (predicted)
mirBase accessionNone
Sequence 
52- CUUGCAUAACGUGAUAUGCAAGU -75
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