| MirGeneDB ID | Cpo-Mir-326 |
|---|
| Family name |
MIR-326 (all species) |
|---|
| Species |
Guinea pig (Cavia porcellus) |
|---|
| MiRBase ID |
cpo-mir-326
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-326
Cfa-Mir-326
Cja-Mir-326
Dno-Mir-326
Eca-Mir-326
Ete-Mir-326
Hsa-Mir-326
Laf-Mir-326
Mml-Mir-326
Mmr-Mir-326
Mmu-Mir-326
Ocu-Mir-326
Pab-Mir-326
Rno-Mir-326
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(cavPor3) |
scaffold_103: 327534-327592 [+]
UCSC
|
|---|
| Seed |
CUCUGGG |
|---|
Precursor
(pre-Mir +30nt flank) |
GUCCUCAGAGCCUCCUCUGUCUGCUGGGCUGGGGGCAGGGCCUUUGUGAAGGCGGGUGUGCAAAGAUCGCCUCUGGGCCCUUCCUCCAGCCCCGAGGCGGAUUCACCUUCAGCUUCAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUCCUCAGAGCCUCCUCUG ---| C UUGUGA GGUGUG
UCUGCU GGGCUGGGGG AGGGCCU AGGCG \
AGGCGG CCCGACCUCC UCCCGGG UCCGC C
UGACUUCGACUUCCACUU- AGC^ U UC---- UAGAAA
110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Cpo-Mir-326_5p* (predicted) |
| mirBase accession | MIMAT0047160 |
|---|
| Sequence |
0- GGGGGCAGGGCCUUUGUGAAGGCG -24
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-326_3p |
| mirBase accession | MIMAT0047161 |
|---|
| Sequence |
39- CCUCUGGGCCCUUCCUCCAG -59
Get sequence
|
|---|
