MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-338-o1

Family name MIR-338 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-338-o2  Ebu-Mir-338-P3 
Orthologues Ami-Mir-338-P1  Cli-Mir-338-P1  Cmi-Mir-338-P1  Cpi-Mir-338-P1  Dre-Mir-338-P1  Gmo-Mir-338-P1  Lch-Mir-338-P1  Loc-Mir-338-P1  Mal-Mir-338-P1  Mun-Mir-338-P1  Sto-Mir-338-P1  Tgu-Mir-338-P1  Tni-Mir-338-P1  Xla-Mir-338-P1a  Xla-Mir-338-P1b  Xtr-Mir-338-P1 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010512.1: 3093234-3093293 [+] UCSC Ensembl
Seed CCAGCAU
Precursor
(pre-Mir +30nt flank)		 
AGGUCGGGCCAAUUUGUGCUCCUUUCCAGAAACAAUAUCCUGAUGCUGAUGAGUGAACACUUAAAGCUCCAGCAUCAGUGAUUUUGUUACUGGCAGGGCAGUUCAAGCAGCUGGUGACAG
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Structure
        10         20         30         40        50          
AGGUCGGGCCAAUUUGU-   -    U    A     U   -|        AU    GAACA 
                  GCU CCUU CCAG AACAA AUC CUGAUGCUG  GAGU     \
                  UGA GGGA GGUC UUGUU UAG GACUACGAC  CUCG     C
GACAGUGGUCGACGAACU   C    C    A     U   U^        --    AAAUU 
.       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ebu-Mir-338-o1_5p* (predicted)
mirBase accessionNone
Sequence 
0- AACAAUAUCCUGAUGCUGAUGAGU -24
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Mature sequence

Ebu-Mir-338-o1_3p
mirBase accessionNone
Sequence 
37- UCCAGCAUCAGUGAUUUUGUUAC -60
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