MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-1662-P4

Family name MIR-1662 (all species)
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-1662-P3 
Orthologues Aca-Mir-1662  Ami-Mir-1662  Cli-Mir-1662  Cpi-Mir-1662  Gga-Mir-1662  Mun-Mir-1662  Spt-Mir-1662  Tgu-Mir-1662  Xtr-Mir-1662 
Node of Origin (locus) G. japonicus
Node of Origin (family) Tetrapoda
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015176079.1: 94305-94364 [+]
Seed UGACAUC
Precursor
(pre-Mir +30nt flank)		 
CGACGCUGUGCCUAGCUGUGCUCUGUGGGUUUGACAUCAUCAUACUUGGGAUGUUAUGACACAAAAGUCCCAAGCGGGCUGAUGUCAGGCCUAAGAUGGCUGCCGUCCUGUCUUGCUUUG
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Structure
        10         20         30         40        50         
CGACGCUGUGCCUAGCUGU-   CUG-              -| AUA        GUUAUG 
                    GCU    UGGGUUUGACAUCA UC   CUUGGGAU      A
                    CGG    AUCCGGACUGUAGU GG   GAACCCUG      C
GUUUCGUUCUGUCCUGCCGU   UAGA              C^ GC-        AAAACA 
.       110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
To
Mature sequence

Gja-Mir-1662-P4_5p
mirBase accessionNone
Sequence 
0- UUGACAUCAUCAUACUUGGGAU -22
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Star sequence

Gja-Mir-1662-P4_3p* (predicted)
mirBase accessionNone
Sequence 
38- CCCAAGCGGGCUGAUGUCAGGC -60
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