MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-148-P2

Family name MIR-148 (all species)
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-148
Paralogues Gmo-Mir-148-P3 
Orthologues Cmi-Mir-148-P2  Dre-Mir-148-P2  Ebu-Mir-148  Loc-Mir-148-P2  Mal-Mir-148-P2  Pma-Mir-148-o2  Tni-Mir-148-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_1009: 245024-245081 [-] UCSC Ensembl
Seed CAGUGCA
Precursor
(pre-Mir +30nt flank)		 
CUGUGAGGUGGCACUGUGGCUCCCCAAAUAAAGUUCUGUGAUACACUCAGACUGUAAUUGACGGUAGUCAGUGCAUUACAGAACUUUGUUUUGGGAGUAAAGUACUAACCGGGAACCG
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Structure
        10          20        30        40        50         
CUGUGAGGUGGCACUGUG--|     C                 A    CA    GUAAU 
                    GCUCCC AAAUAAAGUUCUGUGAU CACU  GACU     U
                    UGAGGG UUUGUUUCAAGACAUUA GUGA  CUGA     G
GCCAAGGGCCAAUCAUGAAA^     U                 C    --    UGGCA 
      110       100        90        80        70          60
Deep sequencing
CommentThe highest read count is monoadenylated at the 3' end of the 3p arm.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-148-P2_5p*
mirBase accessionMIMAT0044086
Sequence 
0- AAGUUCUGUGAUACACUCAGACU -23
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Mature sequence

Gmo-Mir-148-P2_3p
mirBase accessionMIMAT0044087
Sequence 
37- UCAGUGCAUUACAGAACUUUG -58
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