| MirGeneDB ID | Laf-Mir-345-P1 |
| Family name |
MIR-345 (all species) |
| Species |
African bush elephant (Loxodonta africana) |
| MiRBase ID |
|
| Paralogues |
Laf-Mir-345-P2
Laf-Mir-345-P3
|
| Orthologues |
Bta-Mir-345
Cfa-Mir-345
Cja-Mir-345
Cpo-Mir-345
Dno-Mir-345
Eca-Mir-345
Ete-Mir-345
Hsa-Mir-345
Mml-Mir-345
Mmr-Mir-345
Pab-Mir-345
Rno-Mir-345
|
| Node of Origin (locus) |
L. africana
|
| Node of Origin (family) |
Eutheria
|
Genome context (GCA_000001905.1_Loxafr3.0) |
GL010095.1: 7835378-7835431 [-]
UCSC
Ensembl
|
| Seed |
CUGACUC |
Precursor (pre-Mir +30nt flank) |
AGCAGCAGCUGGGAUUGGAACCCAGGCUUGGCUGACUCCUAGUCCAGUGCUCUUCUCACACAGAGGCCAGAUCAGGGGCAACCACAGCAAAGGGCUUGUGUGAAGCAGCCCAGA
Get precursor sequence
|
| Structure | 10 20 30 40 50
AGCAGCAGCUGGGAUUGGAA AG- -| C A A CAGU CUUCUC
CCC GCU UGG UG CUCCU GUC GCU \
GGG CGA ACC AC GGGGA UAG CGG A
AGACCCGACGAAGUGUGUUC AAA C^ A - C AC-- AGACAC
110 100 90 80 70 60 |
| Deep sequencing |
|
| 3' NTU |
Unknown
|
| Motifs | No |
Tissue expression
|
|
| Mature sequence |
Laf-Mir-345-P1_5p |
| mirBase accession | None |
| Sequence |
0- GCUGACUCCUAGUCCAGUGCU -21
Get sequence
|
| Star sequence |
Laf-Mir-345-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
34- GGCCAGAUCAGGGGCAACCA -54
Get sequence
|