| MirGeneDB ID | Neu-Mir-1805 |
| Family name |
MIR-1805 (all species) |
| Species |
Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Aca-Mir-1805
Ami-Mir-1805
Cli-Mir-1805
Cpi-Mir-1805
Gga-Mir-1805
Gja-Mir-1805-P3
Gja-Mir-1805-P4
Mdo-Mir-1805
Pbv-Mir-1805
Sha-Mir-1805
Spt-Mir-1805
Tgu-Mir-1805
Xla-Mir-1805-P1
Xla-Mir-1805-P2
Xtr-Mir-1805
|
| Node of Origin (locus) |
Tetrapoda
|
| Node of Origin (family) |
Tetrapoda
|
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 401946502-401946562 [-]
UCSC
Ensembl
|
| Seed |
GUAUUGG |
Precursor (pre-Mir +30nt flank) |
UGGGAAAGAAUGGAAGGGAUGGAUUCUGGGAGUUGUAGCCUUUCAAACAGAGCUCUGAAUGUACACACCUGUAUUGGAACACUACAGCUCCCCGAACUUCCUCAUGUCACUCCCUGUCUAA
Get precursor sequence
|
| Structure | 10 20 30 40 50
UGGGAAAGAAUGGAAGG- U -- U CC -| AGCUCUGA
GA GGA UUC GGGAGUUGUAG UUUCAA ACAG A
CU CCU AAG CCCUCGACAUC AAGGUU UGUC U
AAUCUGUCCCUCACUGUA - UC C AC A^ CACACAUG
. 110 100 90 80 70 60 |
| Deep sequencing |
|
| 3' NTU |
No
|
| Motifs | No |
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Star sequence |
Neu-Mir-1805_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGUUGUAGCCUUUCAAACAGA -21
Get sequence
|
| Mature sequence |
Neu-Mir-1805_3p |
| mirBase accession | None |
| Sequence |
39- UGUAUUGGAACACUACAGCUCC -61
Get sequence
|