MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-1271

Family name MIR-1271 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1271  Cfa-Mir-1271  Cpo-Mir-1271  Dno-Mir-1271  Eca-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Laf-Mir-1271  Mml-Mir-1271  Mmu-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054683.2: 186465992-186466049 [-] UCSC Ensembl
Seed UUGGCAC
Precursor
(pre-Mir +30nt flank)		 
ACCUCUGUAUCCCCAGCACCCAGAUCAGUGCUUGGCACCUAGCAAGCACUCAGUAAAUACUUGUUGAGUGCCUGCUAUGUGCCAGGCAUUGUGCUGAGGGCUUUGUGGGGAUGCAGAG
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Structure
        10         20         30        40        50        
ACCUCUGUAUCCCCAGCA-  -|  AU             C     A       GUAAA 
                   CC CAG  CAGUGCUUGGCAC UAGCA GCACUCA     U
                   GG GUC  GUUACGGACCGUG AUCGU CGUGAGU     A
GAGACGUAGGGGUGUUUCG  A^  GU             U     C       UGUUC 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-1271_5p
mirBase accessionNone
Sequence 
0- CUUGGCACCUAGCAAGCACUCA -22
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Star sequence

Pab-Mir-1271_3p* (predicted)
mirBase accessionNone
Sequence 
36- AGUGCCUGCUAUGUGCCAGGCA -58
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