| MirGeneDB ID | Pab-Mir-676 |
|---|
| Family name |
MIR-676 (all species) |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Cfa-Mir-676
Cja-Mir-676
Cpo-Mir-676
Dno-Mir-676
Eca-Mir-676
Hsa-Mir-676
Laf-Mir-676
Mml-Mir-676
Mmr-Mir-676
Mmu-Mir-676
Ocu-Mir-676
Rno-Mir-676
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 74854169-74854225 [+]
UCSC
Ensembl
|
|---|
| Seed |
CGUCCUA |
|---|
Precursor
(pre-Mir +30nt flank) |
UUCAUAUCAGAUUCUCACCUGAACGCAUGACUCUUCAACCUCAGGACUUGCAGAAUUGAUGGAAUGCCGUCCUAAGGUUGUUGAGUUGUGCGUUUCUGGGCAUUUCAUCUCUAUGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCAUAUCAGAUUCUCA- U-| UG UU C UU GAAUU
CC GAACGCA ACUC CAACCU AGGAC GCA G
GG UUUGCGU UGAG GUUGGA UCCUG CGU A
AGGUAUCUCUACUUUACG UC^ GU UU A C- AAGGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Pab-Mir-676_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CUCUUCAACCUCAGGACUUGCA -22
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-676_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CCGUCCUAAGGUUGUUGAGUU -57
Get sequence
|
|---|
