| MirGeneDB ID | Pab-Mir-760 |
|---|
| Family name |
MIR-760 (all species) |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-760
Cja-Mir-760
Cpo-Mir-760
Dno-Mir-760
Eca-Mir-760
Ete-Mir-760
Hsa-Mir-760
Laf-Mir-760
Mml-Mir-760
Mmr-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Rno-Mir-760
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 139138914-139138971 [-]
UCSC
Ensembl
|
|---|
| Seed |
GGCUCUG |
|---|
Precursor
(pre-Mir +30nt flank) |
GGAGGAUGCUGCGGCGCGGGGCGCGUCGCCCCCCUCAGUCUACCAGAGCCCGGAUACCUCAGAAAUUCGGCUCUGGGUCUGUGGGGAGCGAAAUGCAACCCAAACCCCGUUUUUCCGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGAGGAUGCUGCGGCGC- G-| CG C U UCUA C UACCU
GG GCG UCGC CCCC CAG CCAGAGCC GGA \
CC CGU AGCG GGGG GUC GGUCUCGG CUU C
AGCCUUUUUGCCCCAAAC AA^ AA A U UG-- - AAAGA
110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Pab-Mir-760_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CCCCUCAGUCUACCAGAGCCCGGA -24
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-760_3p |
| mirBase accession | None |
|---|
| Sequence |
37- CGGCUCUGGGUCUGUGGGGAG -58
Get sequence
|
|---|
