MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-205-o2

Family name MIR-205 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-205b
Paralogues Pma-Mir-205-o1 
Orthologues Aca-Mir-205-P2  Ami-Mir-205-P2  Cli-Mir-205-P2  Cmi-Mir-205-P2  Cpi-Mir-205-P2  Gga-Mir-205-P2  Gja-Mir-205-P2  Pbv-Mir-205-P2  Spt-Mir-205-P2  Sto-Mir-205-P2  Tgu-Mir-205-P2 
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046116.1: 8977433-8977496 [+] UCSC Ensembl
Seed CCUUCAU
Precursor
(pre-Mir +30nt flank)		 
CUCCCGAGAGAUAUCCGGUGAGCUCUGUUGCCCUUCAUUCCACCGGAGUCUGUUAACGCAAGGGCCACGCCAGAUUCCGGUCGGAUGAAGUCCACCAGGCACCGGGCACGCUGCGGGGAGUGUC
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Structure
        10        20           30        40        50        60 
CUCCCGAGAGAUAUCCGGUGA---| U   U  CC        C           UUAACGCA 
                        GC CUG UG  CUUCAUUC ACCGGAGUCUG        A
                        CG GAC AC  GAAGUAGG UGGCCUUAGAC        G
CUGUGAGGGGCGUCGCACGGGCCA^ -   C  CU        C           CGCACCGG 
  120       110       100         90        80        70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-205-o2_5p
mirBase accessionMIMAT0019519
Sequence 
0- CCCUUCAUUCCACCGGAGUCUGU -23
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Star sequence

Pma-Mir-205-o2_3p* (predicted)
mirBase accessionNone
Sequence 
41- AGAUUCCGGUCGGAUGAAGUCCA -64
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