MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-725

Family name MIR-725 (all species)
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues
Orthologues Cmi-Mir-725  Cpi-Mir-725  Dre-Mir-725  Gmo-Mir-725  Lch-Mir-725  Loc-Mir-725  Mal-Mir-725  Sto-Mir-725  Xla-Mir-725-P1  Xla-Mir-725-P2  Xtr-Mir-725 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 1: 16440623-16440684 [+] UCSC Ensembl
Seed UCAGUCA
Precursor
(pre-Mir +30nt flank)		 
CAGUCCCACGCUCCUCUCAGUCCCACGCUCAGCUAGAAACUUUGCCUGGAAAUUUACUCGAUUGCAAAGUCUCAGUCAUUGUUUCUGGUCGUGCGUGUGACGCGCAUCCAAGGCCAGACGGC
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Structure
        10          20        30        40         50          
CAGUCCCACGCUCCUCUCA--   C     UCA         UU  C   -| AAUUUACUC 
                     GUC CACGC   GCUAGAAAC  UG CUG GA         \
                     CAG GUGCG   UGGUCUUUG  AC GAC CU         G
CGGCAGACCGGAACCUACGCG   U     UGC         UU  U   U^ GAAACGUUA 
120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
Sp Sp Sp To
Star sequence

Tni-Mir-725_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGCUAGAAACUUUGCCUGGAAA -22
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Mature sequence

Tni-Mir-725_3p
mirBase accessionNone
Sequence 
40- CUCAGUCAUUGUUUCUGGUCGU -62
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