MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-7147

Family name MIR-7147 (all species)
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID
Paralogues
Orthologues Cpi-Mir-7147  Dre-Mir-7147  Lch-Mir-7147  Loc-Mir-7147  Mal-Mir-7147  Tni-Mir-7147  Xla-Mir-7147-P1  Xla-Mir-7147-P2 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(xenTro9_add)		 chr6: 128084324-128084382 [+] UCSC Ensembl
Seed GUACCAU
Precursor
(pre-Mir +30nt flank)		 
AGGGGAUUUCUGUCUUGGAGCUGUCAGUGCUGUACCAUGCUGGUAGCCAGUGUAAUGAAAGUUGCUCCUGGCAACCAGUGUUGUGCCACCCUGGCUGCUCAGUGUGUAUGCCUCUUGGU
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Structure
        10          20        30        40        50         
AGGGGAUUUCUGUCUUG--|   U     UGCU    C        A     UGUAAUGA 
                   GAGC GUCAG    GUAC AUGCUGGU GCCAG        \
                   CUCG CGGUC    CGUG UGUGACCA CGGUC        A
UGGUUCUCCGUAUGUGUGA^   U     CCAC    U        A     CUCGUUGA 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-7147_5p
mirBase accessionNone
Sequence 
0- UGUACCAUGCUGGUAGCCAGUG -22
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Star sequence

Xtr-Mir-7147_3p* (predicted)
mirBase accessionNone
Sequence 
37- CUGGCAACCAGUGUUGUGCCAC -59
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