MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-34-P3a

Family name MIR-34 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-449c
Paralogues Gga-Mir-34-P1  Gga-Mir-34-P2a  Gga-Mir-34-P2b  Gga-Mir-34-P3b  Gga-Mir-34-P3c  Gga-Mir-34-P3d 
Orthologues Aae-Mir-34  Aca-Mir-34-P3a  Aga-Mir-34  Agr-Mir-34  Ami-Mir-34-P3a  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3a  Cbr-Mir-34  Cel-Mir-34  Cin-Mir-34  Cja-Mir-34-P3a-v1  Cli-Mir-34-P3a  Cmi-Mir-34-P3a  Cpi-Mir-34-P3a  Cpo-Mir-34-P3a  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3a  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Gja-Mir-34-P3a  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Hsa-Mir-34-P3a-v1  Isc-Mir-34  Lch-Mir-34-P3a  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Loc-Mir-34-P3a  Mgi-Mir-34  Mmu-Mir-34-P3a  Mom-Mir-34  Mun-Mir-34-P3a  Npo-Mir-34  Oan-Mir-34-P3a  Obi-Mir-34  Ocu-Mir-34-P3a  Ofu-Mir-34  Ovu-Mir-34  Pab-Mir-34-P3a  Pau-Mir-34  Pbv-Mir-34-P3a  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Pve-Mir-34  Rno-Mir-34-P3a  Rph-Mir-34  Sko-Mir-34  Snu-Mir-34  Spu-Mir-34  Sto-Mir-34-P3a  Tca-Mir-34  Tgu-Mir-34-P3a  Tur-Mir-34  War-Mir-34  Xla-Mir-34-P3a1  Xla-Mir-34-P3a2  Xtr-Mir-34-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Gallus_gallus.GRCg6a)		 Z: 16704036-16704097 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-34-P3a)		 Mir-34-P3d Z: 16702024-16702082 [-] UCSC Ensembl
Mir-34-P3c Z: 16702892-16702949 [-] UCSC Ensembl
Mir-34-P3b Z: 16703052-16703110 [-] UCSC Ensembl
Mir-34-P3a Z: 16704036-16704097 [-] UCSC Ensembl
Seed GGCAGUG
Precursor
(pre-Mir +30nt flank)		 
GCAGCUGAGACGGAGUGGAACGCUGUGGUCUGGCAGUGCGUGUUAGCUGGCUGUUGUCCCAAGGUACCAACAGCUGCUCACGGCACUCCAGACUGCCACGCUCAAGAGCAUUGUGGAAAGGC
Get precursor sequence
Structure
        10          20        30        40        50        60  
GCAGCUGAGACGGAGUG--| A  CU UG      C     G   U   U       GUCCCA 
                   GA CG  G  GUCUGG AGUGC UGU AGC GGCUGUU      \
                   CU GC  C  CAGACC UCACG GCA UCG UCGACAA      A
CGGAAAGGUGUUACGAGAA^ C  AC GU      -     -   C   -       CCAUGG 
120       110       100        90          80         70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-34-P3a_5p
mirBase accessionMIMAT0007602
Sequence 
0- UGGCAGUGCGUGUUAGCUGGCUGUU -25
Get sequence
Proposed targets TargetScanVert: gga-miR-449c-5p
miRDB: MIMAT0007602
Star sequence

Gga-Mir-34-P3a_3p*
mirBase accessionMIMAT0007603
Sequence 
40- CAGCUGCUCACGGCACUCCAGA -62
Get sequence
Proposed targets TargetScanVert: gga-miR-449c-3p
miRDB: MIMAT0007603