MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-216-P2g

Family name MIR-216 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-216-P2h  Lpo-Mir-216-P2i 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Hme-Mir-216-P2  Isc-Mir-216-P2  Pca-Mir-216-P2  Tca-Mir-216-P2  Tur-Mir-216-P2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Nephrozoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668423.1: 43803-43858 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P2g)		 Mir-12-P5 NW_013668423.1: 42459-42516 [-] Ensembl
Mir-216-P2g NW_013668423.1: 43803-43858 [-] Ensembl
Seed AAUCUCA
Precursor
(pre-Mir +30nt flank)		 
CUUCCCCCGGAAUGUAUAAUGGUGACGGUCCAAUCUCAUGAGGUAACUCCGGAUAAGCUUACUUCGGGGUACCUGGUGAGAUGCGAUAGGCACCAAGUUCUCGCCAAUCUAACCUU
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Structure
        10          20        30         40        50        
CUUCCCCCGGAAUGUAUAA--     ACG   -| A      G     A       UAAG 
                     UGGUG   GUC CA UCUCAU AGGUA CUCCGGA    \
                     ACCAC   UAG GU AGAGUG UCCAU GGGGCUU    C
UUCCAAUCUAACCGCUCUUGA     GGA   C^ -      G     -       CAUU 
    110       100        90         80        70         60
Deep sequencing
CommentIt appears that the 5p arm is monouridylated at its 3' end.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Mature sequence

Lpo-Mir-216-P2g_5p
mirBase accessionNone
Sequence 
0- CAAUCUCAUGAGGUAACUCCGGA -23
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Star sequence

Lpo-Mir-216-P2g_3p*
mirBase accessionNone
Sequence 
34- CGGGGUACCUGGUGAGAUGCGA -56
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